Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38067

Metabolite ID
P38067
Deionized mass
510.2693 Da
Average m/z
511.2819
Average RT
18.8594
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)3.803e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.699e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)6.892e-12
Glyma.18G273000 hypothetical protein NA 2Chr18:55575628–55582063 (-)4.164e-13
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)9.202e-11
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)9.203e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)3.803e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)6.747e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.915e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.07e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.181e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.96e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.96e-14
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)3.527e-14
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 1Chr03:5848597–5849782 (-)5.02e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.613e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.532e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)7.198e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.276e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)5.645e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.04e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.04e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)1.534e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)5.755e-13
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)7.768e-14
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)3.547e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.301e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)8.463e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.293e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.159e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)8.219e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.228e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.347e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.274e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.274e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.274e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.274e-12
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)4.561e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.892e-12
Glyma.15G262400 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein 1Chr15:49495728–49499550 (+)6.256e-11
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)4.253e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)2.474e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)7.855e-12