Overview Annotation GWAS Evidence Associated genes

P55428

Metabolite ID
P55428
Deionized mass
579.4128 Da
Average m/z
580.4192
Average RT
31.8251
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G226300 hypothetical protein NA 10Chr18:51471540–51498344 (+)5.899e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 2Chr02:38993365–39000790 (+)1.622e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.668e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.189e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.913e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)5.932e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)9.366e-14
Glyma.14G191400 hypothetical protein NA 1Chr14:45610980–45612600 (+)9.562e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)5.199e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.298e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.298e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)6e-11