Overview Annotation GWAS Evidence Associated genes

P55421

Metabolite ID
P55421
Deionized mass
544.3663 Da
Average m/z
545.3792
Average RT
31.8192
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 3Chr18:55076548–55086297 (+)1.052e-13
Glyma.16G189500 hypothetical protein NA 2Chr16:35202920–35206459 (-)4.43e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.574e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.039e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)8.161e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.308e-13
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)7.835e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)7.835e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.912e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)4.804e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)4.804e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.893e-11
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.83e-11
Glyma.16G189400 hypothetical protein NA 1Chr16:35199461–35202266 (+)4.43e-11
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 1Chr18:55019514–55022070 (-)8.017e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.956e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.685e-11