Overview Annotation GWAS Evidence Associated genes

P55108

Metabolite ID
P55108
Deionized mass
307.1772 Da
Average m/z
308.1854
Average RT
31.5794
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G080900 hypothetical protein NA 5Chr07:7381339–7405785 (+)5.375e-14
Glyma.18G302200 hypothetical protein NA 2Chr18:57998307–58011231 (+)3.401e-14
Glyma.07G080400 hypothetical protein AT2G42010:PLDBETA1:phospholipase D beta 1 1Chr07:7312327–7319873 (-)5.375e-14
Glyma.07G081300 hypothetical protein NA 1Chr07:7442510–7449341 (-)5.375e-14
Glyma.08G307700 Similar to 60S ribosomal protein L18a-1 AT2G34480:AT2G34480:Ribosomal protein L18ae/LX family protein 1Chr08:42603547–42605822 (+)5.451e-21
Glyma.09G188600 hypothetical protein NA 1Chr09:41310448–41312248 (-)9.604e-11
Glyma.13G195800 hypothetical protein AT3G54390:AT3G54390:sequence-specific DNA binding transcription factor 1Chr13:30928265–30932209 (-)2.718e-11
Glyma.14G020100 hypothetical protein NA 1Chr14:1431751–1433639 (+)9.715e-11
Glyma.18G211100 hypothetical protein NA 1Chr18:49772784–49775630 (+)9.959e-13
Glyma.18G299900 hypothetical protein AT2G43200:AT2G43200:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr18:57763913–57768976 (+)2.273e-13
Glyma.18G300700 hypothetical protein AT1G05820:SPPL5:SIGNAL PEPTIDE PEPTIDASE-LIKE 5 1Chr18:57852461–57859687 (+)3.401e-14
Glyma.20G070800 VAD1 AT1G02120:VAD1:GRAM domain family protein 1Chr20:25156336–25176331 (-)5.375e-14