Overview Annotation GWAS Evidence Associated genes

P55025

Metabolite ID
P55025
Deionized mass
258.1935 Da
Average m/z
259.1989
Average RT
31.5576
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.285e-11
Glyma.16G189500 hypothetical protein NA 2Chr16:35202920–35206459 (-)1.361e-11
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 2Chr20:34757381–34771672 (+)8.74e-12
Glyma.12G055100 hypothetical protein AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase 1Chr12:3988442–3991287 (-)2.483e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.387e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.387e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.071e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.071e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.071e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)4.222e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)8.226e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)3.831e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.796e-13
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.797e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.285e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)9.355e-12
Glyma.16G189400 hypothetical protein NA 1Chr16:35199461–35202266 (+)1.361e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)6.213e-13
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 1Chr20:34832271–34839955 (-)8.141e-11