Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P55016

Metabolite ID
P55016
Deionized mass
435.3643 Da
Average m/z
436.3688
Average RT
31.5492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.964e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.322e-11
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)2.92e-12
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 2Chr09:6509441–6524102 (+)2.274e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.39e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.859e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)5.422e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.678e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)5.345e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.163e-11
Glyma.07G010600 hypothetical protein NA 1Chr07:811039–816200 (+)1.788e-11
Glyma.07G010700 hypothetical protein AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 1Chr07:817488–822276 (+)1.788e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)2.222e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)2.222e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)7.944e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)8.602e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)1.885e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)3.596e-11
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 1Chr09:6487197–6498214 (-)3.388e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)7.248e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.532e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.874e-11
Glyma.10G186500 PT7 NA 1Chr10:41946209–41950274 (-)3.24e-16
Glyma.10G187600 hypothetical protein NA 1Chr10:42055791–42063117 (-)4.962e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.903e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.903e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.644e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.443e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.443e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.859e-11
Glyma.13G200200 hypothetical protein NA 1Chr13:31385590–31386947 (+)2.895e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)7.45e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)7.652e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)7.2e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.818e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)5.438e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.079e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.437e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)4.266e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.674e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.674e-12
Glyma.18G294900 hypothetical protein NA 1Chr18:57235496–57236456 (+)7.245e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)3.469e-12
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)6.762e-11