Overview Annotation GWAS Evidence Associated genes

P54983

Metabolite ID
P54983
Deionized mass
468.3189 Da
Average m/z
469.3275
Average RT
31.5039
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)8.877e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)4.619e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.012e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.012e-11
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)5.7e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.259e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)2.978e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)2.978e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.029e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.462e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.462e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.462e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)4.807e-12
Glyma.14G190300 hypothetical protein AT2G04240:XERICO:RING/U-box superfamily protein 1Chr14:45531920–45533895 (-)4.53e-12
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 1Chr14:45536719–45544087 (-)4.53e-12
Glyma.16G165100 hypothetical protein AT5G52820:AT5G52820:WD-40 repeat family protein / notchless protein 1Chr16:32435021–32442097 (+)6.757e-11