Overview Annotation GWAS Evidence Associated genes

P54976

Metabolite ID
P54976
Deionized mass
393.1951 Da
Average m/z
394.2025
Average RT
31.5002
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G226300 hypothetical protein NA 6Chr18:51471540–51498344 (+)2.875e-13
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 2Chr18:51943730–51947645 (+)5.239e-16
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 2Chr18:51979095–51987062 (-)2.851e-11
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 1Chr01:4304713–4310259 (-)5.723e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.149e-12