Overview Annotation GWAS Evidence Associated genes

P54941

Metabolite ID
P54941
Deionized mass
424.2790 Da
Average m/z
425.2857
Average RT
31.4797
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)4.915e-11
Glyma.18G201700 hypothetical protein NA 2Chr18:48175554–48180264 (+)2.218e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.6e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.132e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.288e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.924e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.992e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.921e-15
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)5.163e-11