Overview Annotation GWAS Evidence Associated genes

P54821

Metabolite ID
P54821
Deionized mass
342.1509 Da
Average m/z
343.1581
Average RT
31.3400
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G016000 hypothetical protein AT1G42540:GLR3.3:glutamate receptor 3.3 1Chr04:1212350–1217012 (-)2.617e-12
Glyma.06G268800 hypothetical protein NA 1Chr06:45753991–45792240 (-)6.339e-14
Glyma.09G209500 hypothetical protein NA 1Chr09:43388010–43391593 (+)2.026e-13
Glyma.10G139400 hypothetical protein AT3G62040:AT3G62040:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr10:37321393–37324552 (+)2.798e-13
Glyma.10G139600 hypothetical protein AT4G01650:AT4G01650:Polyketide cyclase / dehydrase and lipid transport protein 1Chr10:37327677–37331902 (+)2.798e-13
Glyma.10G140000 hypothetical protein AT1G02330:AT1G02330:integrator complex subunit-like protein 1Chr10:37350249–37353278 (+)2.798e-13
Glyma.13G247400 hypothetical protein AT4G21430:B160:protein B160 1Chr13:35586790–35592668 (-)1.644e-14
Glyma.13G248300 hypothetical protein NA 1Chr13:35640626–35644598 (+)1.786e-11
Glyma.18G255200 hypothetical protein NA 1Chr18:54160047–54161267 (-)3.993e-12