Overview Annotation GWAS Evidence Associated genes

P54399

Metabolite ID
P54399
Deionized mass
580.2677 Da
Average m/z
581.2757
Average RT
30.9980
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.821e-11
Glyma.15G010300 hypothetical protein AT3G15690:AT3G15690:Single hybrid motif superfamily protein 1Chr15:789395–793808 (-)2.821e-11
Glyma.15G010400 hypothetical protein NA 1Chr15:799119–804583 (-)2.821e-11
Glyma.15G010800 hypothetical protein AT3G15650:AT3G15650:alpha/beta-Hydrolases superfamily protein 1Chr15:815501–820618 (-)2.821e-11