Overview Annotation GWAS Evidence Associated genes

P54334

Metabolite ID
P54334
Deionized mass
674.4246 Da
Average m/z
675.4289
Average RT
30.9388
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.882e-14
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.015e-14
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)5.903e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)5.903e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)2.651e-11
Glyma.13G170000 hypothetical protein AT3G01460:MBD9:methyl-CPG-binding domain 9 1Chr13:28401415–28416198 (-)4.551e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)9.097e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.985e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.214e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)7.596e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.22e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)9.095e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)9.095e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.74e-13
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 1Chr18:51979095–51987062 (-)9.826e-11
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)8.503e-11