Overview Annotation GWAS Evidence Associated genes

P54224

Metabolite ID
P54224
Deionized mass
398.2962 Da
Average m/z
399.3042
Average RT
30.8128
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G107900 hypothetical protein AT1G61670:AT1G61670:Lung seven transmembrane receptor family protein 1Chr07:10602117–10606079 (+)7.523e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.126e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.956e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)1.18e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)5.121e-13