Overview Annotation GWAS Evidence Associated genes

P54141

Metabolite ID
P54141
Deionized mass
524.2401 Da
Average m/z
525.2453
Average RT
30.7268
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)5.21e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)5.081e-11
Glyma.19G027200 hypothetical protein AT5G15400:AT5G15400:U-box domain-containing protein 1Chr19:3392784–3401129 (-)2.847e-11