Overview Annotation GWAS Evidence Associated genes

P54092

Metabolite ID
P54092
Deionized mass
233.1878 Da
Average m/z
234.1959
Average RT
30.6454
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)4.245e-11
Glyma.03G016900 hypothetical protein NA 1Chr03:1702419–1707451 (+)5.75e-11
Glyma.08G082100 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr08:6196059–6199325 (+)1.154e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)1.069e-11