P54078
Metabolite ID
P54078
Deionized mass
258.8889 Da
Average m/z
259.8961
Average RT
30.6286
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 2.577e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 3.714e-11 | |
| Glyma.09G187700 | hypothetical protein | AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein | 1 | Chr09:41217358–41221592 (-) | 6.501e-12 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 5.588e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 1.883e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 5.822e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 5.822e-11 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 4.105e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 9.86e-11 | |
| Glyma.18G129100 | hypothetical protein | NA | 1 | Chr18:17426745–17444205 (+) | 8.885e-11 | |
| Glyma.18G129200 | hypothetical protein | AT1G59820:ALA3:aminophospholipid ATPase 3 | 1 | Chr18:17461040–17470275 (+) | 8.885e-11 | |
| Glyma.18G129600 | hypothetical protein | NA | 1 | Chr18:17682371–17682793 (+) | 8.885e-11 | |
| Glyma.20G223300 | hypothetical protein | AT1G09770:CDC5:cell division cycle 5 | 1 | Chr20:45791239–45803369 (-) | 1.956e-12 |