Overview Annotation GWAS Evidence Associated genes

P54003

Metabolite ID
P54003
Deionized mass
257.9006 Da
Average m/z
258.9081
Average RT
30.5313
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G190200 hypothetical protein AT2G04270:RNEE/G:RNAse E/G-like protein 2Chr14:45506913–45525397 (-)8.542e-13
Glyma.14G189900 hypothetical protein AT3G07660:AT3G07660:flocculation protein (DUF1296) 1Chr14:45471265–45483220 (+)8.542e-13
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 1Chr14:45536719–45544087 (-)8.542e-13
Glyma.14G190700 hypothetical protein AT5G58940:CRCK1:calmodulin-binding receptor-like cytoplasmic kinase 1 1Chr14:45560369–45564345 (-)8.542e-13
Glyma.14G192500 hypothetical protein AT5G58860:CYP86A1:cytochrome P450, family 86, subfamily A, polypeptide 1 1Chr14:45715135–45717866 (+)8.542e-13