Overview Annotation GWAS Evidence Associated genes

P53843

Metabolite ID
P53843
Deionized mass
286.1900 Da
Average m/z
287.1991
Average RT
30.3592
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G024600 GSTU6 NA 3Chr02:2184460–2191266 (-)4.616e-12
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)1.588e-11
Glyma.02G024900 hypothetical protein AT1G10380:AT1G10380:Putative membrane lipoprotein 1Chr02:2204062–2205751 (+)3.68e-12
Glyma.02G025200 hypothetical protein AT1G10410:AT1G10410:CW14 protein (DUF1336) 1Chr02:2237854–2243130 (-)6.303e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)4.924e-13
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)4.45e-12