P53828
Metabolite ID
P53828
Deionized mass
212.1546 Da
Average m/z
213.1616
Average RT
30.3407
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 2.481e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 3 | Chr06:50191600–50203098 (-) | 5.76e-13 | |
| Glyma.08G300400 | hypothetical protein | AT2G02910:AT2G02910:transmembrane protein (DUF616) | 3 | Chr08:41830891–41843406 (-) | 2.658e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 1.169e-15 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 1.455e-13 | |
| Glyma.20G021900 | hypothetical protein | AT5G37340:AT5G37340:ZPR1 zinc-finger domain protein | 2 | Chr20:2227480–2247807 (+) | 1.623e-13 | |
| Glyma.01G037200 | hypothetical protein | NA | 1 | Chr01:3946315–3948100 (-) | 2.549e-11 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 3.439e-13 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 3.479e-11 | |
| Glyma.02G125700 | hypothetical protein | NA | 1 | Chr02:12589185–12591860 (-) | 4.916e-11 | |
| Glyma.02G296300 | hypothetical protein | AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein | 1 | Chr02:47399263–47406220 (-) | 8.426e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 2.57e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.238e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 5.846e-14 | |
| Glyma.06G078400 | hypothetical protein | AT4G31290:AT4G31290:ChaC-like family protein | 1 | Chr06:6068728–6071360 (+) | 1.812e-12 | |
| Glyma.06G079400 | hypothetical protein | NA | 1 | Chr06:6105463–6107101 (+) | 4.673e-11 | |
| Glyma.06G203300 | hypothetical protein | AT1G18640:PSP:3-phosphoserine phosphatase | 1 | Chr06:19025714–19030363 (+) | 3.348e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 2.481e-11 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 2.481e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 6.975e-11 | |
| Glyma.08G149600 | hypothetical protein | NA | 1 | Chr08:11473348–11478495 (+) | 6.331e-12 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 3.156e-11 | |
| Glyma.08G300000 | hypothetical protein | NA | 1 | Chr08:41812728–41812868 (+) | 2.658e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.165e-11 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 9.738e-11 | |
| Glyma.10G238200 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr10:46680865–46684088 (+) | 4.74e-11 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 7.675e-12 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 3.054e-11 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 3.054e-11 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 3.054e-11 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 3.054e-11 | |
| Glyma.12G008300 | hypothetical protein | AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein | 1 | Chr12:613939–617457 (+) | 3.779e-13 | |
| Glyma.13G180300 | hypothetical protein | NA | 1 | Chr13:29378090–29379784 (-) | 1.298e-12 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 5.613e-19 | |
| Glyma.13G184500 | hypothetical protein | NA | 1 | Chr13:29829471–29834027 (+) | 2.944e-12 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 2.036e-12 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 1.455e-13 | |
| Glyma.14G149000 | hypothetical protein | NA | 1 | Chr14:32164321–32167686 (+) | 2.188e-11 | |
| Glyma.14G201600 | hypothetical protein | NA | 1 | Chr14:46703283–46706500 (+) | 9.241e-13 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 9.241e-13 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.112e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.513e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 9.216e-11 | |
| Glyma.18G021700 | hypothetical protein | NA | 1 | Chr18:1590986–1596262 (-) | 4.339e-11 | |
| Glyma.18G027300 | hypothetical protein | NA | 1 | Chr18:2049280–2053959 (-) | 7.708e-12 | |
| Glyma.19G011900 | hypothetical protein | AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… | 1 | Chr19:1148510–1149495 (+) | 8.588e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 3.792e-15 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 3.792e-15 | |
| Glyma.20G021600 | PT12 | AT1G20860:PHT1;8:phosphate transporter 1;8__AT1G76430:PHT1;9:phosphate transporter 1;9 | 1 | Chr20:2196534–2205616 (+) | 3.335e-14 | |
| Glyma.20G022000 | hypothetical protein | NA | 1 | Chr20:2262949–2267229 (+) | 1.623e-13 | |
| Glyma.20G022500 | hypothetical protein | NA | 1 | Chr20:2342943–2353164 (+) | 4.178e-12 | |
| Glyma.20G026300 | hypothetical protein | AT1G26560:BGLU40:beta glucosidase 40 | 1 | Chr20:2894580–2905241 (+) | 2.09e-11 | |
| Glyma.20G105500 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… | 1 | Chr20:34813357–34815998 (-) | 1.467e-12 | |
| Glyma.20G109600 | hypothetical protein | AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 | 1 | Chr20:35200934–35205885 (-) | 8.583e-11 |