Overview Annotation GWAS Evidence Associated genes

P53745

Metabolite ID
P53745
Deionized mass
598.2445 Da
Average m/z
599.2499
Average RT
30.3018
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.705e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.268e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.317e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)7.514e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)9.621e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.591e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.489e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)6.51e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)6.51e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)8.489e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.382e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.139e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)3.442e-15
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)4.822e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)6.645e-11
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)9.146e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.28e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)7.55e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)1.311e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.311e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.912e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)9.623e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.342e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)4.747e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)4.747e-11
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)1.629e-13
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)2.47e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.4e-15
Glyma.20G026700 hypothetical protein NA 1Chr20:2935653–2945665 (-)1.463e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)5.129e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)5.372e-11
Glyma.20G107000 hypothetical protein NA 1Chr20:34968161–34968457 (+)3.643e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.495e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)6.877e-12