Overview Annotation GWAS Evidence Associated genes

P53556

Metabolite ID
P53556
Deionized mass
132.0928 Da
Average m/z
133.1001
Average RT
30.0548
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G190200 hypothetical protein AT5G22050:AT5G22050:Protein kinase superfamily protein 1Chr12:35173526–35176783 (-)1.522e-12
Glyma.12G190500 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 1Chr12:35206636–35216806 (-)3.347e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.132e-11
Glyma.18G130100 hypothetical protein AT1G27200:AT1G27200:glycosyltransferase family protein (DUF23) 1Chr18:17956083–17958355 (-)2.824e-13