Overview Annotation GWAS Evidence Associated genes

P53508

Metabolite ID
P53508
Deionized mass
300.2034 Da
Average m/z
301.2107
Average RT
30.0404
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G041000 hypothetical protein AT3G06770:AT3G06770:Pectin lyase-like superfamily protein 2Chr09:3405065–3408889 (-)4.842e-11
Glyma.14G203800 hypothetical protein NA 2Chr14:46841491–46853116 (-)1.568e-11
Glyma.07G246800 hypothetical protein AT3G16630:KINESIN-13A:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr07:42568653–42576617 (-)4.842e-11
Glyma.07G246900 hypothetical protein AT3G06910:ULP1A:UB-like protease 1A__AT4G00690:ULP1B:UB-like protease 1B__AT4G15880:ESD4:Cysteine proteinases superfami… 1Chr07:42581544–42589124 (-)4.842e-11
Glyma.07G247000 hypothetical protein NA 1Chr07:42591461–42592588 (-)4.842e-11
Glyma.09G040600 hypothetical protein NA 1Chr09:3385940–3388420 (+)4.842e-11