P53489
Metabolite ID
P53489
Deionized mass
108.0927 Da
Average m/z
109.1002
Average RT
30.0389
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.09G069800 | hypothetical protein | AT3G45310:AT3G45310:Cysteine proteinases superfamily protein | 3 | Chr09:7089916–7094633 (-) | 1.011e-11 | |
| Glyma.04G220700 | hypothetical protein | AT2G40460:AT2G40460:Major facilitator superfamily protein | 1 | Chr04:49148342–49152686 (-) | 3.006e-11 | |
| Glyma.05G196500 | hypothetical protein | NA | 1 | Chr05:38071633–38076930 (-) | 2.53e-16 | |
| Glyma.08G282000 | hypothetical protein | AT3G26510:AT3G26510:Octicosapeptide/Phox/Bem1p family protein | 1 | Chr08:38697197–38699247 (-) | 2.53e-16 | |
| Glyma.08G282100 | hypothetical protein | AT3G26570:PHT2;1:phosphate transporter 2;1 | 1 | Chr08:38707723–38713794 (+) | 2.53e-16 | |
| Glyma.08G282600 | hypothetical protein | AT1G12950:RSH2:root hair specific 2 | 1 | Chr08:38828348–38845825 (+) | 2.53e-16 | |
| Glyma.08G282800 | PAO1 | peroxisomal copper-containing amine oxidase | AT2G42490:AT2G42490:Copper amine oxidase family protein | 1 | Chr08:38863320–38871843 (+) | 7.07e-12 |
| Glyma.08G282900 | hypothetical protein | NA | 1 | Chr08:38889111–38891198 (-) | 7.07e-12 | |
| Glyma.08G283600 | hypothetical protein | AT1G10750:AT1G10750:carboxyl-terminal peptidase, putative (DUF239) | 1 | Chr08:38986105–38990873 (-) | 7.07e-12 | |
| Glyma.08G284200 | hypothetical protein | AT1G70520:CRK2:cysteine-rich RLK (RECEPTOR-like protein kinase) 2 | 1 | Chr08:39216423–39218978 (+) | 7.07e-12 | |
| Glyma.08G284300 | hypothetical protein | NA | 1 | Chr08:39223726–39232627 (-) | 7.07e-12 | |
| Glyma.08G284500 | hypothetical protein | AT1G60790:TBL2:trichome birefringence-like protein (DUF828) | 1 | Chr08:39304110–39308211 (-) | 2.53e-16 | |
| Glyma.13G042300 | hypothetical protein | NA | 1 | Chr13:13554013–13555877 (-) | 1.847e-14 | |
| Glyma.13G055600 | hypothetical protein | NA | 1 | Chr13:15309709–15313747 (+) | 1.911e-11 | |
| Glyma.13G085200 | hypothetical protein | NA | 1 | Chr13:19667765–19669546 (+) | 1.911e-11 | |
| Glyma.13G171600 | hypothetical protein | NA | 1 | Chr13:28571391–28577773 (-) | 7.812e-11 | |
| Glyma.13G172100 | hypothetical protein | NA | 1 | Chr13:28608195–28612280 (+) | 7.812e-11 |