Overview Annotation GWAS Evidence Associated genes

P53477

Metabolite ID
P53477
Deionized mass
242.2008 Da
Average m/z
243.2085
Average RT
30.0376
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G201300 hypothetical protein AT1G15210:ABCG35:pleiotropic drug resistance 7__AT1G59870:PEN3:ABC-2 and Plant PDR ABC-type transporter family protein_… 2Chr08:16293501–16303097 (-)2.324e-13
Glyma.09G036100 hypothetical protein AT3G17020:AT3G17020:Adenine nucleotide alpha hydrolases-like superfamily protein 2Chr09:3026375–3028451 (+)7.429e-11
Glyma.18G023800 hypothetical protein NA 2Chr18:1735265–1740174 (-)1.128e-13
Glyma.18G232100 hypothetical protein NA 2Chr18:52058080–52061986 (-)7.423e-15
Glyma.01G159400 hypothetical protein AT5G66020:ATSAC1B:Phosphoinositide phosphatase family protein 1Chr01:49746187–49756140 (-)8.355e-13
Glyma.08G201500 hypothetical protein NA 1Chr08:16327532–16333195 (+)2.324e-13
Glyma.08G201600 hypothetical protein NA 1Chr08:16334022–16339935 (-)2.324e-13
Glyma.08G360200 hypothetical protein AT5G13180:NAC083:NAC domain containing protein 83 1Chr08:47210855–47212576 (-)5.744e-15
Glyma.09G036000 hypothetical protein AT3G66658:ALDH22A1:aldehyde dehydrogenase 22A1 1Chr09:3014591–3025170 (-)7.429e-11
Glyma.12G023400 hypothetical protein NA 1Chr12:1719014–1722542 (+)3.332e-13
Glyma.12G024200 hypothetical protein AT2G21180:AT2G21180:uncharacterized protein 1Chr12:1762798–1764125 (+)3.332e-13
Glyma.13G179100 hypothetical protein AT5G22100:AT5G22100:RNA cyclase family protein 1Chr13:29265973–29269421 (-)3.865e-11
Glyma.13G179400 hypothetical protein AT2G22870:EMB2001:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr13:29297113–29300588 (+)6.387e-15
Glyma.13G195900 hypothetical protein AT1G08315:AT1G08315:ARM repeat superfamily protein 1Chr13:30939701–30941879 (-)2.696e-12
Glyma.18G022800 hypothetical protein AT5G05360:AT5G05360:uncharacterized protein 1Chr18:1666281–1667924 (+)1.128e-13