Overview Annotation GWAS Evidence Associated genes

P53427

Metabolite ID
P53427
Deionized mass
279.0851 Da
Average m/z
280.0917
Average RT
30.0151
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.256e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.256e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)8.385e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)2.629e-11
Glyma.08G299800 hypothetical protein NA 1Chr08:41795912–41796546 (+)8.625e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.959e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.781e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.781e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.256e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.423e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.993e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.869e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.109e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.206e-18
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr18:50088148–50092969 (-)5.823e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)7.212e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.837e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)2.658e-11