Overview Annotation GWAS Evidence Associated genes

P53294

Metabolite ID
P53294
Deionized mass
100.0037 Da
Average m/z
101.0102
Average RT
29.8853
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)1.789e-14
Glyma.01G030500 hypothetical protein NA 1Chr01:3189212–3200277 (+)5.188e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.051e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.12e-14
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)2.617e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.907e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.907e-12
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)3.645e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.907e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.907e-12
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)5.349e-13
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)5.348e-13
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)5.348e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.382e-12
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)1.558e-13
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)8.572e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.246e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)6.062e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.1e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.1e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.695e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.072e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.374e-11