Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P53141

Metabolite ID
P53141
Deionized mass
288.2084 Da
Average m/z
289.2151
Average RT
29.6847
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)4.583e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.015e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.272e-11
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 1Chr01:1573790–1583422 (+)8.636e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.251e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)1.032e-12
Glyma.02G203800 hypothetical protein AT4G30935:WRKY32:WRKY DNA-binding protein 32 1Chr02:38920714–38930381 (+)8.002e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)5.365e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.547e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.015e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.015e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)5.758e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)5.758e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.272e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.272e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.272e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.272e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.504e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)7.775e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)7.317e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.894e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.894e-11
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)4.583e-11
Glyma.20G105000 F-box/LRR-repeat protein 10 AT2G17020:AT2G17020:F-box/RNI-like superfamily protein 1Chr20:34726756–34729686 (+)1.844e-11
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)9.595e-11