Overview Annotation GWAS Evidence Associated genes

P53135

Metabolite ID
P53135
Deionized mass
617.4180 Da
Average m/z
618.4238
Average RT
29.6763
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.691e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.19e-11
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 1Chr18:495989–502111 (-)4.949e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.926e-13
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)2.745e-11
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)6.878e-11