Overview Annotation GWAS Evidence Associated genes

P52951

Metabolite ID
P52951
Deionized mass
406.2508 Da
Average m/z
407.2564
Average RT
29.4047
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)5.933e-11
Glyma.06G306000 hypothetical protein AT2G32430:AT2G32430:Galactosyltransferase family protein__AT1G05170:AT1G05170:Galactosyltransferase family protein 1Chr06:49495126–49500468 (+)3.56e-12
Glyma.15G139900 hypothetical protein AT3G06610:AT3G06610:DNA-binding enhancer protein-like protein 1Chr15:11427754–11431219 (+)9.421e-12
Glyma.15G140200 hypothetical protein AT5G49460:ACLB-2:ATP citrate lyase subunit B 2 1Chr15:11461119–11467932 (-)9.421e-12