Overview Annotation GWAS Evidence Associated genes

P52943

Metabolite ID
P52943
Deionized mass
232.8904 Da
Average m/z
233.8978
Average RT
29.3967
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G193000 hypothetical protein NA 1Chr08:15523813–15534625 (+)2.949e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)8.482e-11
Glyma.14G207500 hypothetical protein NA 1Chr14:47331497–47335155 (-)2.109e-11
Glyma.15G035900 hypothetical protein AT2G29190:PUM2:pumilio 2 1Chr15:2843074–2849389 (-)7.759e-16