Overview Annotation GWAS Evidence Associated genes

P52929

Metabolite ID
P52929
Deionized mass
241.2389 Da
Average m/z
242.2460
Average RT
29.3767
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G227500 hypothetical protein AT1G52370:AT1G52370:Ribosomal protein L22p/L17e family protein 3Chr18:51663506–51669304 (-)7.808e-14
Glyma.18G226300 hypothetical protein NA 2Chr18:51471540–51498344 (+)5.487e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)9.157e-11
Glyma.18G226500 hypothetical protein NA 1Chr18:51507715–51550797 (+)6.839e-16