Overview Annotation GWAS Evidence Associated genes

P52898

Metabolite ID
P52898
Deionized mass
308.1254 Da
Average m/z
309.1333
Average RT
29.3353
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G075800 hypothetical protein AT4G31410:AT4G31410:E3 ubiquitin-protein ligase, putative (DUF1644) 1Chr06:5865835–5869879 (+)7.092e-11
Glyma.13G177600 hypothetical protein NA 1Chr13:29166705–29167801 (-)1.097e-11
Glyma.13G178500 hypothetical protein AT1G28280:AT1G28280:VQ motif-containing protein 1Chr13:29211898–29216138 (-)1.097e-11
Glyma.13G181400 hypothetical protein NA 1Chr13:29466548–29471275 (+)1.097e-11
Glyma.19G148000 hypothetical protein AT2G42080:AT2G42080:Chaperone DnaJ-domain superfamily protein__AT3G58020:AT3G58020:Chaperone DnaJ-domain superfamily pr… 1Chr19:40867988–40872227 (+)1.097e-11
Glyma.20G097500 hypothetical protein NA 1Chr20:34047382–34052996 (+)1.097e-11