Overview Annotation GWAS Evidence Associated genes

P52837

Metabolite ID
P52837
Deionized mass
533.1332 Da
Average m/z
534.1425
Average RT
29.2361
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G290400 hypothetical protein AT1G03770:RING1B:RING 1B 1Chr06:47927556–47934410 (-)3.695e-12
Glyma.06G290600 hypothetical protein AT4G28390:AAC3:ADP/ATP carrier 3 1Chr06:47946032–47949236 (+)3.695e-12
Glyma.06G290800 hypothetical protein AT2G20650:AT2G20650:RING/U-box superfamily protein__AT4G28370:AT4G28370:RING/U-box superfamily protein 1Chr06:47954710–47964808 (-)3.695e-12
Glyma.06G291300 hypothetical protein NA 1Chr06:48016841–48019943 (+)1.344e-13
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)3.548e-17
Glyma.06G293300 hypothetical protein AT4G28280:LLG3:LORELEI-LIKE-GPI ANCHORED PROTEIN 3 1Chr06:48198132–48201464 (-)3.098e-16
Glyma.06G294500 EXPB4 AT4G28250:EXPB3:expansin B3 1Chr06:48356229–48360169 (+)7.299e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.273e-12