Overview Annotation GWAS Evidence Associated genes

P52834

Metabolite ID
P52834
Deionized mass
433.2144 Da
Average m/z
434.2215
Average RT
29.2334
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
21
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

21 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)3.518e-11
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)4.768e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.77e-11
Glyma.06G296500 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr06:48551973–48557217 (-)7.582e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.399e-15
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)5.148e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.819e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)4.452e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)4.452e-12
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)1.301e-11
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)1.301e-11
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)1.301e-11
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)8.424e-11
Glyma.13G166300 hypothetical protein NA 1Chr13:28110251–28113628 (-)9.049e-11
Glyma.13G166900 hypothetical protein NA 1Chr13:28168741–28171815 (+)3.196e-11
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)3.518e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)4.664e-11
Glyma.17G203300 hypothetical protein NA 1Chr17:32451012–32452744 (+)5.62e-12
Glyma.18G040000 GAI AT1G66350:RGL1:RGA-like 1__AT3G03450:RGL2:RGA-like 2 1Chr18:3278869–3281985 (-)8.827e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.472e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.472e-11