Overview Annotation GWAS Evidence Associated genes

P52808

Metabolite ID
P52808
Deionized mass
277.2345 Da
Average m/z
278.2431
Average RT
29.1701
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)1.243e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.632e-11
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)3.523e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)9.433e-14
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)4.726e-13
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)1.157e-11
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 1Chr17:2836787–2841979 (-)3.034e-11
Glyma.17G038500 hypothetical protein NA 1Chr17:2843533–2853547 (-)3.034e-11
Glyma.17G039300 hypothetical protein AT4G15230:ABCG30:pleiotropic drug resistance 2__AT4G15233:ABCG42:ABC-2 and Plant PDR ABC-type transporter family protei… 1Chr17:2918657–2932426 (-)5.252e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)1.851e-12