P52718
Metabolite ID
P52718
Deionized mass
410.2050 Da
Average m/z
411.2125
Average RT
28.9990
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 9.975e-12 | |
| Glyma.13G201600 | hypothetical protein | NA | 2 | Chr13:31521512–31522992 (+) | 3.553e-15 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 2 | Chr13:31727841–31735910 (-) | 1.51e-11 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 7.229e-14 | |
| Glyma.16G055700 | hypothetical protein | AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily | 2 | Chr16:5450641–5458545 (-) | 3.682e-12 | |
| Glyma.03G019600 | hypothetical protein | AT2G45640:SAP18:SIN3 associated polypeptide P18 | 1 | Chr03:2007617–2009871 (+) | 6.908e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 9.272e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.915e-11 | |
| Glyma.04G064500 | hypothetical protein | NA | 1 | Chr04:5367346–5372857 (+) | 3.524e-11 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 8.965e-11 | |
| Glyma.05G182500 | hypothetical protein | AT5G65210:TGA1:bZIP transcription factor family protein | 1 | Chr05:37029299–37037313 (+) | 2.315e-11 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 3.692e-12 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.553e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.314e-11 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 8.401e-11 | |
| Glyma.06G291600 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr06:48024204–48029614 (+) | 1.331e-11 | |
| Glyma.06G291800 | hypothetical protein | NA | 1 | Chr06:48044194–48047197 (-) | 2.11e-11 | |
| Glyma.06G292000 | hypothetical protein | NA | 1 | Chr06:48081084–48084476 (-) | 1.331e-11 | |
| Glyma.06G292100 | hypothetical protein | NA | 1 | Chr06:48095366–48097378 (+) | 1.331e-11 | |
| Glyma.06G292200 | hypothetical protein | AT5G44290:AT5G44290:Protein kinase superfamily protein | 1 | Chr06:48100578–48107433 (-) | 2.11e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 5.933e-11 | |
| Glyma.07G010600 | hypothetical protein | NA | 1 | Chr07:811039–816200 (+) | 4.816e-11 | |
| Glyma.07G010700 | hypothetical protein | AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 | 1 | Chr07:817488–822276 (+) | 4.816e-11 | |
| Glyma.07G011500 | hypothetical protein | NA | 1 | Chr07:879557–882132 (+) | 8.364e-11 | |
| Glyma.07G018100 | hypothetical protein | NA | 1 | Chr07:1442368–1445430 (-) | 1.148e-12 | |
| Glyma.07G018300 | hypothetical protein | AT3G27750:EMB3123:PPR containing protein | 1 | Chr07:1457706–1458428 (+) | 1.148e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 4.499e-14 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 4.499e-14 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 1.456e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 4.214e-12 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 5.829e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 5.829e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 3.108e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 3.108e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 3.108e-11 | |
| Glyma.13G200600 | hypothetical protein | AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein | 1 | Chr13:31428112–31429431 (-) | 1.402e-11 | |
| Glyma.13G203600 | hypothetical protein | AT5G13490:AAC2:ADP/ATP carrier 2 | 1 | Chr13:31753843–31756013 (-) | 1.51e-11 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 1.217e-11 | |
| Glyma.14G075900 | hypothetical protein | NA | 1 | Chr14:6362111–6364010 (-) | 2.498e-16 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 7.229e-14 | |
| Glyma.16G020500 | hypothetical protein | AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr16:1877938–1879947 (-) | 1.01e-11 | |
| Glyma.16G024800 | hypothetical protein | AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 1 | Chr16:2407161–2410997 (-) | 4.368e-11 | |
| Glyma.16G028100 | hypothetical protein | AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein | 1 | Chr16:2725294–2733429 (-) | 6.593e-16 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 6.011e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 1.766e-11 | |
| Glyma.17G061900 | hypothetical protein | NA | 1 | Chr17:4728685–4734790 (-) | 8.14e-11 | |
| Glyma.20G217500 | hypothetical protein | AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:45312584–45322950 (-) | 1.054e-12 |