Overview Annotation GWAS Evidence Associated genes

P52675

Metabolite ID
P52675
Deionized mass
607.2551 Da
Average m/z
608.2596
Average RT
28.9162
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 2Chr16:30434508–30475458 (-)1.507e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)4.506e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)9.062e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.456e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.621e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)4.335e-11
Glyma.16G144300 hypothetical protein NA 1Chr16:30443185–30446450 (+)7.962e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.172e-11
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.805e-11