Overview Annotation GWAS Evidence Associated genes

P52634

Metabolite ID
P52634
Deionized mass
608.4393 Da
Average m/z
609.4467
Average RT
28.8139
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G226300 hypothetical protein NA 3Chr18:51471540–51498344 (+)1.389e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)2.561e-17
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)2.724e-18
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.572e-11
Glyma.09G231600 hypothetical protein AT1G71692:AGL12:AGAMOUS-like 12 1Chr09:45485256–45489213 (+)3.159e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.805e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.438e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.438e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.438e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)4.257e-12
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)9.662e-13
Glyma.20G234500 hypothetical protein AT3G05380:ALY2:ALWAYS EARLY 2 1Chr20:46698301–46713330 (+)6.935e-11
Glyma.20G234600 hypothetical protein AT1G09020:SNF4:sucrose nonfermenting-like protein 1Chr20:46716599–46733339 (-)6.935e-11
Glyma.20G234700 hypothetical protein NA 1Chr20:46737685–46740853 (-)6.935e-11