Overview Annotation GWAS Evidence Associated genes

P52563

Metabolite ID
P52563
Deionized mass
304.1641 Da
Average m/z
305.1718
Average RT
28.7069
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.743e-13
Glyma.07G078000 hypothetical protein NA 2Chr07:7121636–7126695 (+)9.598e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.147e-12
Glyma.02G229900 hypothetical protein AT5G58520:AT5G58520:Protein kinase superfamily protein 1Chr02:41743114–41748263 (-)3.567e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.993e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.001e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)8.08e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)8.08e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.025e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)7.289e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)1.487e-11
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)9.276e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.476e-11
Glyma.14G211800 hypothetical protein AT1G66080:AT1G66080:hikeshi-like protein 1Chr14:47664851–47670630 (+)6.493e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.867e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)6.021e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.743e-13
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)2.369e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.054e-11