Overview Annotation GWAS Evidence Associated genes

P52542

Metabolite ID
P52542
Deionized mass
363.2718 Da
Average m/z
364.2793
Average RT
28.6828
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)4.425e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)2.34e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.603e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)5.768e-11
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)2.511e-14
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)2.511e-14
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)6.062e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.062e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)7e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.332e-12