Overview Annotation GWAS Evidence Associated genes

P52522

Metabolite ID
P52522
Deionized mass
138.9781 Da
Average m/z
139.9856
Average RT
28.6608
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.138e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.313e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.313e-15
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.796e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.676e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.138e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.3e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.3e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.313e-15
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)7.638e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)9.894e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 1Chr18:47102746–47129707 (+)4.511e-11
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)1.017e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)8.765e-11
Glyma.19G009900 hypothetical protein NA 1Chr19:923053–937826 (-)4.716e-11