P52498
Metabolite ID
P52498
Deionized mass
336.1350 Da
Average m/z
337.1418
Average RT
28.6299
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.08G119300 | hypothetical protein | AT1G29330:ERD2:ER lumen protein retaining receptor family protein | 2 | Chr08:9198213–9201688 (-) | 1.22e-13 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 5.752e-13 | |
| Glyma.16G050900 | COL16 | NA | 2 | Chr16:4874634–4878624 (+) | 4.607e-13 | |
| Glyma.03G001600 | hypothetical protein | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:177390–180789 (-) | 4.626e-11 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 8.278e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.849e-11 | |
| Glyma.08G118500 | hypothetical protein | NA | 1 | Chr08:9161382–9162471 (+) | 5.592e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 5.752e-13 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 3.006e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 3.006e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 3.006e-11 | |
| Glyma.13G184500 | hypothetical protein | NA | 1 | Chr13:29829471–29834027 (+) | 8.91e-11 | |
| Glyma.14G119800 | hypothetical protein | AT1G43850:SEU:SEUSS transcriptional co-regulator | 1 | Chr14:16751592–16763348 (-) | 6.578e-11 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 6.845e-12 |
| Glyma.16G051100 | hypothetical protein | NA | 1 | Chr16:4896279–4898219 (-) | 3.839e-13 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 5.642e-12 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 8.636e-13 | |
| Glyma.17G121800 | hypothetical protein | AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 | 1 | Chr17:9746590–9748712 (+) | 4.697e-11 |