Overview Annotation GWAS Evidence Associated genes

P52480

Metabolite ID
P52480
Deionized mass
334.1208 Da
Average m/z
335.1288
Average RT
28.6106
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 2Chr02:38993365–39000790 (+)1.49e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.559e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.861e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)5.54e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)5.54e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)5.54e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)5.54e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)5.54e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)5.54e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)5.54e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)9.131e-12