Overview Annotation GWAS Evidence Associated genes

P52456

Metabolite ID
P52456
Deionized mass
336.1401 Da
Average m/z
337.1480
Average RT
28.6001
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)5.167e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)5.167e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)5.167e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.304e-12
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)5.238e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.181e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.253e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.213e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.459e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.077e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)7.673e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)5.167e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)5.167e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)5.167e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)5.167e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)5.167e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)2.706e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.752e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.438e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)7.931e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)6.441e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.419e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.019e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.389e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.389e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.89e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)8.786e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)8.282e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.642e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.642e-12