Overview Annotation GWAS Evidence Associated genes

P52253

Metabolite ID
P52253
Deionized mass
337.2581 Da
Average m/z
338.2657
Average RT
28.5114
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.028e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.028e-12
Glyma.08G337300 hypothetical protein AT3G13230:AT3G13230:RNA-binding KH domain-containing protein 1Chr08:45420731–45422106 (+)1.543e-12