Overview Annotation GWAS Evidence Associated genes

P52236

Metabolite ID
P52236
Deionized mass
366.2540 Da
Average m/z
367.2635
Average RT
28.4910
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)2.777e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.963e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)2.777e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.822e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)4.401e-11
Glyma.08G227900 hypothetical protein NA 1Chr08:18551920–18567339 (-)1.695e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)8.284e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)1.425e-11
Glyma.18G259000 hypothetical protein NA 1Chr18:54442402–54446789 (-)3.764e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.363e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.756e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.756e-13