Overview Annotation GWAS Evidence Associated genes

P52151

Metabolite ID
P52151
Deionized mass
402.1790 Da
Average m/z
403.1884
Average RT
28.4299
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 2Chr04:8887523–8888545 (-)3.699e-11
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)2.501e-11
Glyma.04G098300 hypothetical protein NA 1Chr04:8910522–8912389 (-)3.699e-11
Glyma.04G098400 hypothetical protein AT1G22490:AT1G22490:basic helix-loop-helix (bHLH) DNA-binding superfamily protein__AT1G72210:AT1G72210:basic helix-loop… 1Chr04:8914410–8916406 (+)6.223e-11
Glyma.05G123300 hypothetical protein NA 1Chr05:31696132–31700404 (+)2.665e-11
Glyma.05G124200 hypothetical protein AT4G20790:AT4G20790:Leucine-rich repeat protein kinase family protein 1Chr05:31776906–31778608 (-)7.431e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.734e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.247e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.247e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.921e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.026e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.026e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.026e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.186e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.186e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)2.539e-11