Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P51807

Metabolite ID
P51807
Deionized mass
197.0929 Da
Average m/z
198.0994
Average RT
28.0967
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)2.719e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)3.706e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.166e-11
Glyma.09G058900 hypothetical protein NA 2Chr09:5397968–5404650 (-)3.312e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.117e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.117e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)4.37e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.196e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.196e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.542e-12
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)4.461e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.846e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.01e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.057e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)7.076e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)7.85e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)7.85e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)6.57e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)8.502e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)9.426e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)6.567e-11
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)8.754e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)1.577e-12
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)4.8e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)9.611e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.36e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.882e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.882e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.145e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.145e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.117e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.24e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)3.719e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.33e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.438e-14
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)6.243e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.855e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)2.544e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.166e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.166e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.231e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)9.464e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.92e-11
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)6.297e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.823e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)1.445e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.248e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.248e-11