Overview Annotation GWAS Evidence Associated genes

P51762

Metabolite ID
P51762
Deionized mass
393.2155 Da
Average m/z
394.2225
Average RT
28.0680
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.035e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.87e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)4.87e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.063e-11
Glyma.08G123400 hypothetical protein NA 1Chr08:9486565–9490448 (-)8.063e-11
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)8.063e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)2.673e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)1.978e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)1.978e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)1.978e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.101e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.807e-11