Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P51725

Metabolite ID
P51725
Deionized mass
548.2996 Da
Average m/z
549.3031
Average RT
28.0409
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 4Chr08:11525692–11536927 (+)2.159e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)9.578e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.633e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.633e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)7.86e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)4.645e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.394e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)8.857e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.777e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.357e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.992e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.992e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.992e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.992e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.992e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.992e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.992e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)9.578e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)2.52e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.456e-14
Glyma.03G143300 hypothetical protein NA 1Chr03:35907767–35909994 (+)1.576e-11
Glyma.03G143600 hypothetical protein NA 1Chr03:35928279–35931862 (-)1.576e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.313e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.554e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.282e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.714e-16
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.871e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.505e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.841e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.057e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)7.53e-11
Glyma.06G147600 BRI1A brassinosteroid receptor AT4G39400:BRI1:Leucine-rich receptor-like protein kinase family protein 1Chr06:12052122–12056526 (-)8.024e-11
Glyma.06G165200 hypothetical protein AT5G50920:CLPC1:CLPC homologue 1 1Chr06:13694179–13701889 (+)8.106e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)3.675e-11
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)5.963e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)9.085e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)6.138e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)9.499e-13
Glyma.07G223600 hypothetical protein NA 1Chr07:40077049–40082294 (+)2.411e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)1.509e-11
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)3.545e-12
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)3.947e-11
Glyma.08G150400 hypothetical protein NA 1Chr08:11565265–11571675 (+)2.083e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.063e-11
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)3.972e-11
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 1Chr11:15312631–15316628 (+)6.542e-11
Glyma.12G079700 hypothetical protein AT1G08110:AT1G08110:lactoylglutathione lyase family protein / glyoxalase I family protein 1Chr12:6241940–6246776 (+)8.709e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.39e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.39e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.633e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.627e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)1.498e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)1.498e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.089e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)7.86e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.48e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)6.171e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.133e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.217e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.893e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.324e-11